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found it in annotations of HelmChart object:

Name:         rke2-cilium
Namespace:    kube-system
Labels:       <http://objectset.rio.cattle.io/hash=764ed973268673c4efa4f048c1416d0240068445|objectset.rio.cattle.io/hash=764ed973268673c4efa4f048c1416d0240068445>
Annotations:  <http://helm.cattle.io/chart-url|helm.cattle.io/chart-url>: <https://rke2-charts.rancher.io/assets/rke2-cilium/rke2-cilium-1.11.101.tgz>

Exactly. We are consuming the upstream charts but changing some values. However, by using

HelmChartConfig

you can deploy Cilium with whatever config you want