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While not directly related, this is how I use helm to install Rancher https://managing.blue/2024/06/11/how-i-setup-rancher-these-days/ That way creation of the Ingress and the certificate is decoupled and you can manage them independently. In the article I mention the HA Proxy for Ingress, but you can use any Ingress you like. Currently I have switched back to nginx and have experimented with Traefik too.

Thank you, I figured it out, I used the custom ssl configuration, then I had cert-manager add the cert to that specific secret. I think the issue is I did not use helm to install cert-manager